ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

C0NJ23_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/C0NJ23_F1_nD2

C0NJ23_F1_nD2

UID: 003204461

AlphaFold

Range: 116-205
AlphaFold: AF-C0NJ23
UniProt: C0NJ23 (all domains)
Gene: HCBG_03153

Protein: Exosome complex exonuclease RRP4

3D Structure

Loading viewer...

Related Domains

Browse other domains in RRP4_S1 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOB-fold(2)

HH-groupNucleic acid-binding protein(2.1)

TT-groupNucleic acid-binding protein(2.1.1)

FFamilyRRP4_S1(2.1.1.109)

Pfam Families

PF21266S1_RRP4

RRP4, S1 domain

ClanCL0021OB

External Links

AlphaFold DB: C0NJ23 UniProt: C0NJ23

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 116-205