ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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C0NEM5_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/C0NEM5_F1_nD3

C0NEM5_F1_nD3

UID: 003206665

AlphaFold

Range: 476-580
AlphaFold: AF-C0NEM5
UniProt: C0NEM5 (all domains)
Gene: HCBG_01341

Protein: RNA splicing factor Pad-1

3D Structure

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Related Domains

Browse other domains in RBM39linker →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupRNA-binding domain, RBD(304.9)

TT-groupRNA-binding domain, RBD(304.9.1)

FFamilyRBM39linker(304.9.1.24)

Pfam Families

PF15519RBM39linker

linker between RRM2 and RRM3 domains in RBM39 protein

External Links

AlphaFold DB: C0NEM5 UniProt: C0NEM5

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 476-580