ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
RCSB PDB
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C0NJN5_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/C0NJN5_F1_nD1

C0NJN5_F1_nD1

UID: 003207701

AlphaFold

Range: 41-85
AlphaFold: AF-C0NJN5
UniProt: C0NJN5 (all domains)
Gene: HCBG_03365

Protein: Splicing factor 3a

3D Structure

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Related Domains

Browse other domains in zf-met →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupbeta-beta-alpha zinc fingers(386)

HH-groupbeta-beta-alpha zinc fingers(386.1)

TT-groupbeta-beta-alpha zinc fingers(386.1.1)

FFamilyzf-met(386.1.1.20)

Pfam Families

Zinc-finger of C2H2 type

ClanCL0361C2H2-zf

External Links

AlphaFold DB: C0NJN5 UniProt: C0NJN5

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 41-85