ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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C0NBN9_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/C0NBN9_F1_nD1

C0NBN9_F1_nD1

UID: 003208182

AlphaFold

Range: 181-650
AlphaFold: AF-C0NBN9
UniProt: C0NBN9 (all domains)
Gene: HCBG_00535

Protein: Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 (EC 3.6.4.13)

3D Structure

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Related Domains

Browse other domains in DEAD+Helicase_C →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyDEAD+Helicase_C(2004.1.1.364)

Pfam Families

DEAD/DEAH box helicase

ClanCL0023P-loop_NTPase

PF00271Helicase_C

Helicase conserved C-terminal domain

ClanCL0023P-loop_NTPase

External Links

AlphaFold DB: C0NBN9 UniProt: C0NBN9

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 181-650