ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
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Q21305_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q21305_F1_nD1

Q21305_F1_nD1

UID: 003219223

AlphaFold

Range: 48-135
AlphaFold: AF-Q21305
UniProt: Q21305 (all domains)
Gene: sox-2

Protein: Transcription factor sox-2

3D Structure

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Related Domains

Browse other domains in HMG_box →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHMG-box-like(190)

HH-groupHMG-box(190.1)

TT-groupHMG-box(190.1.1)

FFamilyHMG_box(190.1.1.1)

Pfam Families

PF00505HMG_box

HMG (high mobility group) box

ClanCL0114HMG-box

External Links

AlphaFold DB: Q21305 UniProt: Q21305

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 48-135