ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q9U3B9_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/Q9U3B9_F1_nD3

Q9U3B9_F1_nD3

UID: 003219923

RepresentativeAlphaFold

Range: 466-565
AlphaFold: AF-Q9U3B9
UniProt: Q9U3B9 (all domains)
Gene: npp-1

Protein: Nucleoporin Nup54 alpha-helical domain-containing protein

3D Structure

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Related Domains

Browse other domains in Nup54 →

Classification

AArchitecturealpha duplicates or obligate multimers(a.8)

XX-groupHLH-like(105)

HH-groupHLH, helix-loop-helix DNA-binding domain(105.1)

TT-groupHLH, helix-loop-helix DNA-binding domain(105.1.1)

FFamilyNup54(105.1.1.94)

Pfam Families

Nucleoporin complex subunit 54

External Links

AlphaFold DB: Q9U3B9 UniProt: Q9U3B9

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 466-565