ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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U4PCM1_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/U4PCM1_F1_nD1

U4PCM1_F1_nD1

UID: 003221316

AlphaFold

Range: 76-430
AlphaFold: AF-U4PCM1
UniProt: U4PCM1 (all domains)
Gene: pfs-2

Protein: pre-mRNA 3' end processing protein pfs-2 (Polyadenylation factor subunit homolog 2)

3D Structure

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Related Domains

Browse other domains in WD40, Beta-prop_IFT140_1st →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupbeta-propeller-like(5)

HH-groupbeta-propeller(5.1)

TT-group7-bladed(5.1.4)

FFamilyWD40, Beta-prop_IFT140_1st(5.1.4.334)

Pfam Families

WD domain, G-beta repeat

ClanCL0186Beta_propeller

PF23383Beta-prop_IFT140_1st

IFT140 first beta-propeller

ClanCL0186Beta_propeller

External Links

AlphaFold DB: U4PCM1 UniProt: U4PCM1

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 76-430