ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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G5EBS1_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/G5EBS1_F1_nD2

G5EBS1_F1_nD2

UID: 003222489

AlphaFold

Range: 16-135,206-380
AlphaFold: AF-G5EBS1
UniProt: G5EBS1 (all domains)
Gene: gro-1

Protein: C2H2-type domain-containing protein (tRNA isopentenyl transferase)

3D Structure

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Related Domains

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Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyIPPT(2004.1.1.71)

Pfam Families

IPP transferase

ClanCL0023P-loop_NTPase

External Links

AlphaFold DB: G5EBS1 UniProt: G5EBS1

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 16-135,206-380