ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
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Q9NAB5_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q9NAB5_F1_nD2

Q9NAB5_F1_nD2

UID: 003226017

AlphaFold

Range: 6-45,236-455
AlphaFold: AF-Q9NAB5
UniProt: Q9NAB5 (all domains)
Gene: ptr-20

Protein: SSD domain-containing protein

3D Structure

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Related Domains

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Classification

AArchitecturealpha bundles(a.7)

XX-groupMultidrug efflux transporter AcrB transmembrane domain(5067)

HH-groupMultidrug efflux transporter AcrB transmembrane domain(5067.1)

TT-groupMultidrug efflux transporter AcrB transmembrane domain(5067.1.1)

FFamilyPatched(5067.1.1.3)

Pfam Families

PF02460Patched

Patched SSD

ClanCL0322RND_permease

External Links

AlphaFold DB: Q9NAB5 UniProt: Q9NAB5

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-45,236-455