ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q9N3X2_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q9N3X2_F1_nD1

Q9N3X2_F1_nD1

UID: 003226627

AlphaFold

Range: 6-115
AlphaFold: AF-Q9N3X2
UniProt: Q9N3X2 (all domains)
Gene: rps-4

Protein: Small ribosomal subunit protein eS4 (40S ribosomal protein S4)

3D Structure

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Related Domains

Browse other domains in Ribosomal_S4e,RS4NT →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupUbiquitin-related(221.1)

TT-groupAlpha-L RNA-binding motif(221.1.2)

FFamilyRibosomal_S4e,RS4NT(221.1.2.4)

Pfam Families

PF00900Ribosomal_S4e

Ribosomal family S4e

ClanCL0021OB

RS4NT (NUC023) domain

External Links

AlphaFold DB: Q9N3X2 UniProt: Q9N3X2

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-115