ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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G5EDB9_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/G5EDB9_F1_nD4

G5EDB9_F1_nD4

UID: 003226669

AlphaFold

Range: 771-880
AlphaFold: AF-G5EDB9
UniProt: G5EDB9 (all domains)
Gene: pxf-1

Protein: Rap guanine nucleotide exchange factor (RA-GEF) (PDZ-domain-containing exchange factor)

3D Structure

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Related Domains

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Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupUbiquitin-related(221.1)

TT-groupUbiquitin-like(221.1.1)

FFamilyRA(221.1.1.6)

Pfam Families

Ras association (RalGDS/AF-6) domain

ClanCL0072Ubiquitin

External Links

AlphaFold DB: G5EDB9 UniProt: G5EDB9

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 771-880