ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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G5EDS1_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/G5EDS1_F1_nD2

G5EDS1_F1_nD2

UID: 003233479

AlphaFold

Range: 76-145
AlphaFold: AF-G5EDS1
UniProt: G5EDS1 (all domains)
Gene: vab-3

Protein: Paired box protein 6 homolog (Homeobox and paired domain-containing protein vab-3) (Protein male abnormal 18) (Variable abnormal morphology protein 3)

3D Structure

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Related Domains

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Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupThree-helical HTH(101.1.1)

FFamilyPAX(101.1.1.4)

Pfam Families

'Paired box' domain

ClanCL0123HTH

External Links

AlphaFold DB: G5EDS1 UniProt: G5EDS1

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 76-145