ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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G5ED39_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/G5ED39_F1_nD3

G5ED39_F1_nD3

UID: 003234260

AlphaFold

Range: 951-1140
AlphaFold: AF-G5ED39
UniProt: G5ED39 (all domains)
Gene: sep-1

Protein: Separin homolog sep-1 (EC 3.4.22.49) (Separase)

3D Structure

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Related Domains

Browse other domains in Peptidase_C50 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupCaspase-like(7575)

HH-groupCaspase-like(7575.1)

TT-groupCaspase-like(7575.1.1)

FFamilyPeptidase_C50(7575.1.1.5)

Pfam Families

PF03568Separin_C

Separin, protease domain

ClanCL0093Peptidase_CD

External Links

AlphaFold DB: G5ED39 UniProt: G5ED39

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 951-1140