ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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G5ED39_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/G5ED39_F1_nD2

G5ED39_F1_nD2

UID: 003234261

AlphaFold

Range: 706-945
AlphaFold: AF-G5ED39
UniProt: G5ED39 (all domains)
Gene: sep-1

Protein: Separin homolog sep-1 (EC 3.4.22.49) (Separase)

3D Structure

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Related Domains

Browse other domains in Peptidase_C50 →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupSeparase pseudo-protease domain (PPD)(2484.8)

TT-groupSeparase pseudo-protease domain (PPD)(2484.8.1)

FFamilyPeptidase_C50(2484.8.1.1)

Pfam Families

PF03568Separin_C

Separin, protease domain

ClanCL0093Peptidase_CD

External Links

AlphaFold DB: G5ED39 UniProt: G5ED39

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 706-945