ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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G5ECF1_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/G5ECF1_F1_nD1

G5ECF1_F1_nD1

UID: 003234263

AlphaFold

Range: 6-400
AlphaFold: AF-G5ECF1
UniProt: G5ECF1 (all domains)
Gene: smg-5

Protein: Nonsense-mediated mRNA decay protein (PIN domain-containing protein)

3D Structure

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Related Domains

Browse other domains in EST1-like_DNA_bind →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyEST1-like_DNA_bind(109.4.1.294)

Pfam Families

PF22695EST1-like_DNA_bind

EST1-like DNA-binding domain

ClanCL0020TPR

External Links

AlphaFold DB: G5ECF1 UniProt: G5ECF1

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-400