ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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G5EF68_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/G5EF68_F1_nD2

G5EF68_F1_nD2

UID: 003235814

AlphaFold

Range: 66-240
AlphaFold: AF-G5EF68
UniProt: G5EF68 (all domains)
Gene: taf-5

Protein: Transcription initiation factor TFIID subunit 5 (TBP-associated transcription factor family member taf-5)

3D Structure

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Related Domains

Browse other domains in TFIID_NTD2 →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupTaf5 N-terminal domain-like(4320)

HH-groupTaf5 N-terminal domain-like(4320.1)

TT-groupTaf5 N-terminal domain-like(4320.1.1)

FFamilyTFIID_NTD2(4320.1.1.1)

Pfam Families

PF04494TFIID_NTD2

WD40 associated region in TFIID subunit, NTD2 domain

External Links

AlphaFold DB: G5EF68 UniProt: G5EF68

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 66-240