ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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O16530_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/O16530_F1_nD2

O16530_F1_nD2

UID: 003240339

AlphaFold

Range: 6-60,281-470
AlphaFold: AF-O16530
UniProt: O16530 (all domains)
Gene: ptr-3

Protein: SSD domain-containing protein

3D Structure

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Related Domains

Browse other domains in Patched →

Classification

AArchitecturealpha bundles(a.7)

XX-groupMultidrug efflux transporter AcrB transmembrane domain(5067)

HH-groupMultidrug efflux transporter AcrB transmembrane domain(5067.1)

TT-groupMultidrug efflux transporter AcrB transmembrane domain(5067.1.1)

FFamilyPatched(5067.1.1.3)

Pfam Families

PF02460Patched

Patched SSD

ClanCL0322RND_permease

External Links

AlphaFold DB: O16530 UniProt: O16530

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-60,281-470