ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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P34552_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/P34552_F1_nD2

P34552_F1_nD2

UID: 003241505

AlphaFold

Range: 371-735
AlphaFold: AF-P34552
UniProt: P34552 (all domains)
Gene: alx-1

Protein: Apoptosis-linked gene 2-interacting protein X 1 (Prion-like-(Q/N-rich) domain-bearing protein 58) (Protein YNK1)

3D Structure

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Related Domains

Browse other domains in ALIX_LYPXL_bnd →

Classification

AArchitecturealpha duplicates or obligate multimers(a.8)

XX-groupAlix V domain(3285)

HH-groupAlix V domain(3285.1)

TT-groupAlix V domain(3285.1.1)

FFamilyALIX_LYPXL_bnd(3285.1.1.1)

Pfam Families

PF13949ALIX_LYPXL_bnd

ALIX V-shaped domain binding to HIV

External Links

AlphaFold DB: P34552 UniProt: P34552

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 371-735