ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q8T3E0_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q8T3E0_F1_nD2

Q8T3E0_F1_nD2

UID: 003246585

AlphaFold

Range: 216-375,491-540
AlphaFold: AF-Q8T3E0
UniProt: Q8T3E0 (all domains)
Gene: mrt-1

Protein: 5' exonuclease Apollo (EC 3.5.2.6) (DNA cross-link repair 1B protein) (SNM1 homolog B)

3D Structure

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Related Domains

Browse other domains in Lactamase_B_2 →

Classification

AArchitecturea+b four layers(a.13)

XX-groupMetallo-hydrolase/oxidoreductase(247)

HH-groupMetallo-hydrolase/oxidoreductase(247.1)

TT-groupMetallo-hydrolase/oxidoreductase(247.1.1)

FFamilyLactamase_B_2(247.1.1.11)

Pfam Families

PF12706Lactamase_B_2

Beta-lactamase superfamily domain

ClanCL0381Metallo-HOrase

External Links

AlphaFold DB: Q8T3E0 UniProt: Q8T3E0

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 216-375,491-540