ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q65XX2_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/Q65XX2_F1_nD3

Q65XX2_F1_nD3

UID: 003247003

AlphaFold

Range: 881-1120,1146-1170
AlphaFold: AF-Q65XX2
UniProt: Q65XX2 (all domains)
Gene: Y54E10A.11

Protein: E3 ubiquitin-protein ligase listerin (EC 2.3.2.27) (RING-type E3 ubiquitin transferase listerin)

3D Structure

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Related Domains

Browse other domains in LTN1_E3_ligase_5th →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyLTN1_E3_ligase_5th(109.4.1.941)

Pfam Families

PF24618LTN1_E3_ligase_5th

Listerin HEAT repeat region

ClanCL0020TPR

External Links

AlphaFold DB: Q65XX2 UniProt: Q65XX2

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 881-1120,1146-1170