ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q54I89_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q54I89_F1_nD1

Q54I89_F1_nD1

UID: 003247894

AlphaFold

Range: 181-240
UniProt: Q54I89 (all domains)
Gene: upf1

Protein: Regulator of nonsense transcripts 1 (EC 3.6.4.12) (EC 3.6.4.13) (Up-frameshift suppressor 1 homolog)

3D Structure

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Related Domains

Browse other domains in UPF1_Zn_bind →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupRING/U-box(376.1.1)

FFamilyUPF1_Zn_bind(376.1.1.14)

Pfam Families

PF09416UPF1_Zn_bind

RNA helicase (UPF2 interacting domain)

ClanCL0229RING

External Links

UniProt: Q54I89

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