ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q54KQ4_F1_nD7 - ECOD Domain | ECOD

ECOD/Domains/Q54KQ4_F1_nD7

Q54KQ4_F1_nD7

UID: 003248422

AlphaFold

Range: 1196-1365,1411-1480
AlphaFold: AF-Q54KQ4
UniProt: Q54KQ4 (all domains)
Gene: DDB_G0287171

Protein: SNF2-related domain-containing protein

3D Structure

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Related Domains

Browse other domains in SHPRH_helical-2nd →

Classification

AArchitecturealpha bundles(a.7)

XX-groupSpectrin repeat-like(604)

HH-groupE3 ubiquitin-protein ligase SHPRH second helical domain(604.28)

TT-groupE3 ubiquitin-protein ligase SHPRH second helical domain(604.28.1)

FFamilySHPRH_helical-2nd(604.28.1.1)

Pfam Families

PF21324SHPRH_helical-2nd

E3 ubiquitin-protein ligase SHPRH, second helical domain

External Links

AlphaFold DB: Q54KQ4 UniProt: Q54KQ4

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1196-1365,1411-1480