ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

Q54MZ8_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/Q54MZ8_F1_nD3

Q54MZ8_F1_nD3

UID: 003248452

AlphaFold

Range: 361-575
AlphaFold: AF-Q54MZ8
UniProt: Q54MZ8 (all domains)
Gene: mmetS

Protein: Probable methionine--tRNA ligase, mitochondrial (EC 6.1.1.10) (Mitochondrial methionyl-tRNA synthetase) (MtMetRS)

3D Structure

Loading viewer...

Related Domains

Browse other domains in tRNA-synt_1g,Anticodon_3 →

Classification

AArchitecturealpha bundles(a.7)

XX-groupAnticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases(140)

HH-groupAnticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases(140.1)

TT-groupAnticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases(140.1.1)

FFamilytRNA-synt_1g,Anticodon_3(140.1.1.8)

Pfam Families

PF09334tRNA-synt_1g

tRNA synthetases class I (M)

ClanCL0039HUP

PF19303Anticodon_3

Anticodon binding domain of methionyl tRNA ligase

ClanCL0258DALR

External Links

AlphaFold DB: Q54MZ8 UniProt: Q54MZ8

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 361-575