ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q54B09_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q54B09_F1_nD1

Q54B09_F1_nD1

UID: 003249659

AlphaFold

Range: 1-160,181-225,291-315,366-440
AlphaFold: AF-Q54B09
UniProt: Q54B09 (all domains)
Gene: DDB_G0293988

Protein: Uncharacterized protein

3D Structure

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Related Domains

Browse other domains in SPG48, TPR_AP5Z1 →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilySPG48, TPR_AP5Z1(109.4.1.2384)

Pfam Families

AP-5 complex subunit, vesicle trafficking

ClanCL0020TPR

PF25153TPR_AP5Z1

AP-5 complex subunit zeta-1, TPR repeats

ClanCL0020TPR

External Links

AlphaFold DB: Q54B09 UniProt: Q54B09

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-160,181-225,291-315,366-440