ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
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Q54XH4_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/Q54XH4_F1_nD3

Q54XH4_F1_nD3

UID: 003249722

AlphaFold

Range: 272-360
AlphaFold: AF-Q54XH4
UniProt: Q54XH4 (all domains)
Gene: usp39

Protein: SAP DNA-binding domain-containing protein

3D Structure

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Related Domains

Browse other domains in zf-UBP →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupRING/U-box(376.1.1)

FFamilyzf-UBP(376.1.1.5)

Pfam Families

Zn-finger in ubiquitin-hydrolases and other protein

ClanCL0229RING

External Links

AlphaFold DB: Q54XH4 UniProt: Q54XH4

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 272-360