ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

Q55BS4_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q55BS4_F1_nD1

Q55BS4_F1_nD1

UID: 003250282

AlphaFold

Range: 36-90
AlphaFold: AF-Q55BS4
UniProt: Q55BS4 (all domains)
Gene: DDB_G0270388

Protein: RNA polymerase II degradation factor 1

3D Structure

Loading viewer...

Related Domains

Browse other domains in CUE →

Classification

AArchitecturealpha arrays(a.6)

XX-groupRuvA-C(103)

HH-groupRuvA-C, UBA, CRAL/TRIO-N, HBS1(103.1)

TT-groupUBA-like domain(103.1.1)

FFamilyCUE(103.1.1.2)

Pfam Families

CUE domain

ClanCL0214UBA

External Links

AlphaFold DB: Q55BS4 UniProt: Q55BS4

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 36-90