ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

Q54VM1_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q54VM1_F1_nD1

Q54VM1_F1_nD1

UID: 003250478

AlphaFold

Range: 196-414
AlphaFold: AF-Q54VM1
UniProt: Q54VM1 (all domains)
Gene: DDB_G0280257

Protein: Uncharacterized protein

3D Structure

Loading viewer...

Related Domains

Browse other domains in CMS1 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyCMS1(2004.1.1.310)

Pfam Families

U3-containing 90S pre-ribosomal complex subunit

ClanCL0023P-loop_NTPase

External Links

AlphaFold DB: Q54VM1 UniProt: Q54VM1

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 196-414