ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q54EQ8_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q54EQ8_F1_nD2

Q54EQ8_F1_nD2

UID: 003250908

AlphaFold

Range: 1021-1170
AlphaFold: AF-Q54EQ8
UniProt: Q54EQ8 (all domains)
Gene: nup98

Protein: Nuclear pore complex protein Nup98-Nup96 [Cleaved into: Nuclear pore complex protein Nup98 (Nucleoporin Nup98); Nuclear pore complex protein Nup96 (Nucleoporin Nup96)]

3D Structure

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Related Domains

Browse other domains in Nucleoporin2 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupGlycosyl hydrolase domain-like(12)

HH-groupZU5/Nup98-C/GAIN-B autoproteolytic domain-related(12.5)

TT-groupZU5/Nup98-C/GAIN-B autoproteolytic domain-related(12.5.1)

FFamilyNucleoporin2(12.5.1.4)

Pfam Families

PF04096Nucleoporin2

Nup98-96 autopeptidase S59

ClanCL0661Gain

External Links

AlphaFold DB: Q54EQ8 UniProt: Q54EQ8

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1021-1170