ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q9TGM4_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q9TGM4_F1_nD1

Q9TGM4_F1_nD1

UID: 003251044

AlphaFold

Range: 6-159
AlphaFold: AF-Q9TGM4
UniProt: Q9TGM4 (all domains)
Gene: ai4

Protein: Intron-encoded endonuclease ai4 (EC 3.1.-.-) (Cox1/2 intron 3 orf)

3D Structure

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Related Domains

Browse other domains in LAGLIDADG_2 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupHoming endonucleases-like(242)

HH-groupHoming endonucleases(242.1)

TT-groupHoming endonucleases(242.1.1)

FFamilyLAGLIDADG_2(242.1.1.2)

Pfam Families

PF03161LAGLIDADG_2

LAGLIDADG DNA endonuclease family

ClanCL0324Homing_endonuc

External Links

AlphaFold DB: Q9TGM4 UniProt: Q9TGM4

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-159