ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q558Y5_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q558Y5_F1_nD1

Q558Y5_F1_nD1

UID: 003251213

AlphaFold

Range: 1-100,131-245
AlphaFold: AF-Q558Y5
UniProt: Q558Y5 (all domains)
Gene: DDB_G0272997

Protein: Xrn1 N-terminal domain-containing protein

3D Structure

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Related Domains

Browse other domains in XRN_N →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHAD domain-like(2006)

HH-groupHAD domain-related(2006.1)

TT-groupPIN domain-like(2006.1.4)

FFamilyXRN_N(2006.1.4.5)

Pfam Families

XRN 5'-3' exonuclease N-terminus

ClanCL0280PIN

External Links

AlphaFold DB: Q558Y5 UniProt: Q558Y5

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-100,131-245