ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q55DG3_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q55DG3_F1_nD1

Q55DG3_F1_nD1

UID: 003252502

AlphaFold

Range: 6-129
AlphaFold: AF-Q55DG3
UniProt: Q55DG3 (all domains)
Gene: DDB_G0269666

Protein: tRNA-splicing endonuclease subunit Sen15 domain-containing protein

3D Structure

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Related Domains

Browse other domains in Sen15 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRestriction endonuclease-like(2008)

HH-grouptRNA-intron endonuclease catalytic domain-like(2008.2)

TT-grouptRNA-intron endonuclease catalytic domain-like(2008.2.1)

FFamilySen15(2008.2.1.2)

Pfam Families

Sen15 protein

ClanCL0236PDDEXK

External Links

AlphaFold DB: Q55DG3 UniProt: Q55DG3

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-129