ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q54X95_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/Q54X95_F1_nD3

Q54X95_F1_nD3

UID: 003253214

AlphaFold

Range: 356-575
AlphaFold: AF-Q54X95
UniProt: Q54X95 (all domains)
Gene: metS

Protein: Probable methionine--tRNA ligase, cytoplasmic (EC 6.1.1.10) (Methionyl-tRNA synthetase) (MetRS)

3D Structure

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Related Domains

Browse other domains in tRNA-synt_1g,Anticodon_3 →

Classification

AArchitecturealpha bundles(a.7)

XX-groupAnticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases(140)

HH-groupAnticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases(140.1)

TT-groupAnticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases(140.1.1)

FFamilytRNA-synt_1g,Anticodon_3(140.1.1.8)

Pfam Families

PF09334tRNA-synt_1g

tRNA synthetases class I (M)

ClanCL0039HUP

PF19303Anticodon_3

Anticodon binding domain of methionyl tRNA ligase

ClanCL0258DALR

External Links

AlphaFold DB: Q54X95 UniProt: Q54X95

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 356-575