ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q54DV0_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q54DV0_F1_nD2

Q54DV0_F1_nD2

UID: 003254580

AlphaFold

Range: 236-305,346-368
AlphaFold: AF-Q54DV0
UniProt: Q54DV0 (all domains)
Gene: ubr7

Protein: Putative E3 ubiquitin-protein ligase ubr7 (EC 2.3.2.27) (RING-type E3 ubiquitin transferase ubr7)

3D Structure

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Related Domains

Browse other domains in PHD_UBR7-like →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupFYVE/PHD zinc finger(376.1.3)

FFamilyPHD_UBR7-like(376.1.3.56)

Pfam Families

PF30811PHD_UBR7-like

UBR7-like PHD finger

ClanCL0229RING

External Links

AlphaFold DB: Q54DV0 UniProt: Q54DV0

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 236-305,346-368