ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q54U78_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/Q54U78_F1_nD3

Q54U78_F1_nD3

UID: 003254886

AlphaFold

Range: 366-540
AlphaFold: AF-Q54U78
UniProt: Q54U78 (all domains)
Gene: PNKP

Protein: SAP DNA-binding domain-containing protein

3D Structure

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Related Domains

Browse other domains in AAA_33 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyAAA_33(2004.1.1.208)

Pfam Families

AAA domain

ClanCL0023P-loop_NTPase

External Links

AlphaFold DB: Q54U78 UniProt: Q54U78

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 366-540