ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q550L8_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/Q550L8_F1_nD3

Q550L8_F1_nD3

UID: 003254981

AlphaFold

Range: 981-990,1016-1130
AlphaFold: AF-Q550L8
UniProt: Q550L8 (all domains)
Gene: ifkB

Protein: Probable serine/threonine-protein kinase ifkB (EC 2.7.11.1) (Initiation factor kinase B)

3D Structure

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Related Domains

Browse other domains in HGTP_anticodon2 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupAnticodon-binding domain of Class II aaRS(7502)

HH-groupAnticodon-binding domain of Class II aaRS(7502.1)

TT-groupAnticodon-binding domain of Class II aaRS(7502.1.1)

FFamilyHGTP_anticodon2(7502.1.1.7)

Pfam Families

PF12745HGTP_anticodon2

Anticodon binding domain of tRNAs

ClanCL0458IIaaRS-ABD

External Links

AlphaFold DB: Q550L8 UniProt: Q550L8

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 981-990,1016-1130