ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q54QB8_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q54QB8_F1_nD1

Q54QB8_F1_nD1

UID: 003256010

AlphaFold

Range: 236-400
AlphaFold: AF-Q54QB8
UniProt: Q54QB8 (all domains)
Gene: msh4

Protein: DNA mismatch repair proteins mutS family domain-containing protein

3D Structure

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Related Domains

Browse other domains in MutS_II →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyMutS_II(2484.1.1.48)

Pfam Families

PF05188MutS_II

MutS domain II

ClanCL0219RNase_H

External Links

AlphaFold DB: Q54QB8 UniProt: Q54QB8

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 236-400