ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q54HG4_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q54HG4_F1_nD1

Q54HG4_F1_nD1

UID: 003257151

AlphaFold

Range: 6-125
AlphaFold: AF-Q54HG4
UniProt: Q54HG4 (all domains)
Gene: rmp

Protein: RNA polymerase II subunit 5-mediating protein homolog (RPB5-mediating protein homolog)

3D Structure

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Related Domains

Browse other domains in Prefoldin →

Classification

AArchitecturealpha bundles(a.7)

XX-groupLong alpha-hairpin(192)

HH-groupPrefoldin(192.2)

TT-groupPrefoldin(192.2.1)

FFamilyPrefoldin(192.2.1.2)

Pfam Families

PF02996Prefoldin

Prefoldin subunit

ClanCL0200Prefoldin

External Links

AlphaFold DB: Q54HG4 UniProt: Q54HG4

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-125