ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q55D85_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q55D85_F1_nD2

Q55D85_F1_nD2

UID: 003257453

AlphaFold

Range: 1-80,366-700
AlphaFold: AF-Q55D85
UniProt: Q55D85 (all domains)
Gene: cas1

Protein: Cycloartenol synthase (EC 5.4.99.8) (2,3-epoxysqualene--cycloartenol cyclase) (Oxidosqualene cyclase)

3D Structure

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Related Domains

Browse other domains in SQHop_cyclase_C →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupalpha/alpha toroid(109.2)

TT-groupalpha/alpha toroid(109.2.1)

FFamilySQHop_cyclase_C(109.2.1.32)

Pfam Families

PF13243SQHop_cyclase_C

Squalene-hopene cyclase C-terminal domain

ClanCL00596_Hairpin

External Links

AlphaFold DB: Q55D85 UniProt: Q55D85

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-80,366-700