ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q54RC3_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q54RC3_F1_nD2

Q54RC3_F1_nD2

UID: 003258135

AlphaFold

Range: 301-325,416-525
AlphaFold: AF-Q54RC3
UniProt: Q54RC3 (all domains)
Gene: top1

Protein: DNA topoisomerase 1 (EC 5.6.2.1) (DNA topoisomerase I)

3D Structure

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Related Domains

Browse other domains in Topoisom_I_N →

Classification

AArchitecturebeta complex topology(a.5)

XX-groupBeta-strand domain in eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment(4039)

HH-groupBeta-strand domain in eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment(4039.1)

TT-groupBeta-strand domain in eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment(4039.1.1)

FFamilyTopoisom_I_N(4039.1.1.1)

Pfam Families

PF02919Topoisom_I_N

Eukaryotic DNA topoisomerase I, DNA binding fragment

External Links

AlphaFold DB: Q54RC3 UniProt: Q54RC3

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 301-325,416-525