ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q54YG9_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/Q54YG9_F1_nD3

Q54YG9_F1_nD3

UID: 003258601

AlphaFold

Range: 271-319
AlphaFold: AF-Q54YG9
UniProt: Q54YG9 (all domains)
Gene: tcea1

Protein: Transcription elongation factor A protein 1 (Transcription elongation factor S-II protein 1) (Transcription elongation factor tf2s)

3D Structure

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Related Domains

Browse other domains in TFIIS_C →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRubredoxin-like(375)

HH-groupRubredoxin-related(375.1)

TT-groupRubredoxin-related(375.1.1)

FFamilyTFIIS_C(375.1.1.7)

Pfam Families

PF01096Zn_ribbon_TFIIS

Transcription factor S-II (TFIIS)

ClanCL0167Zn_Beta_Ribbon

External Links

AlphaFold DB: Q54YG9 UniProt: Q54YG9

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 271-319