ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q54XT5_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q54XT5_F1_nD1

Q54XT5_F1_nD1

UID: 003258813

AlphaFold

Range: 436-510,671-705
AlphaFold: AF-Q54XT5
UniProt: Q54XT5 (all domains)
Gene: DDB_G0278757

Protein: DIS3-like exonuclease 2 (EC 3.1.13.-)

3D Structure

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Related Domains

Browse other domains in Rrp44_CSD1 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOB-fold(2)

HH-groupNucleic acid-binding protein(2.1)

TT-groupNucleic acid-binding protein(2.1.1)

FFamilyRrp44_CSD1(2.1.1.82)

Pfam Families

PF17216Rrp44_CSD1

Rrp44-like cold shock domain

ClanCL0021OB

External Links

AlphaFold DB: Q54XT5 UniProt: Q54XT5

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 436-510,671-705