ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

Q54XT5_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/Q54XT5_F1_nD3

Q54XT5_F1_nD3

UID: 003258821

AlphaFold

Range: 801-1235
AlphaFold: AF-Q54XT5
UniProt: Q54XT5 (all domains)
Gene: DDB_G0278757

Protein: DIS3-like exonuclease 2 (EC 3.1.13.-)

3D Structure

Loading viewer...

Related Domains

Browse other domains in RNB →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOB-fold(2)

HH-groupRNB domain-like(2.9)

TT-groupRNB domain-like(2.9.1)

FFamilyRNB(2.9.1.1)

Pfam Families

RNB domain

ClanCL0021OB

External Links

AlphaFold DB: Q54XT5 UniProt: Q54XT5

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 801-1235