ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q55BK0_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q55BK0_F1_nD1

Q55BK0_F1_nD1

UID: 003259007

AlphaFold

Range: 16-120
AlphaFold: AF-Q55BK0
UniProt: Q55BK0 (all domains)
Gene: ufd1

Protein: Ubiquitin fusion degradation protein 1 homolog

3D Structure

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Related Domains

Browse other domains in UFD1 →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupdouble psi(1.1.2)

FFamilyUFD1(1.1.2.8)

Pfam Families

PF03152UFD1_N1

Ubiquitin fusion degradation protein UFD1, N-terminal subdomain 1

ClanCL0199DPBB

External Links

AlphaFold DB: Q55BK0 UniProt: Q55BK0

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 16-120