ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q54UB1_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q54UB1_F1_nD2

Q54UB1_F1_nD2

UID: 003259160

AlphaFold

Range: 186-300,346-450
AlphaFold: AF-Q54UB1
UniProt: Q54UB1 (all domains)
Gene: trmt6

Protein: tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit trm6 (tRNA(m1A58)-methyltransferase subunit trm6) (tRNA(m1A58)MTase subunit trm6)

3D Structure

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Related Domains

Browse other domains in Gcd10p →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyGcd10p(2003.1.5.36)

Pfam Families

Gcd10p family

External Links

AlphaFold DB: Q54UB1 UniProt: Q54UB1

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 186-300,346-450