ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

Q54JQ5_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q54JQ5_F1_nD2

Q54JQ5_F1_nD2

UID: 003261523

AlphaFold

Range: 276-620,641-825
AlphaFold: AF-Q54JQ5
UniProt: Q54JQ5 (all domains)
Gene: DDB_G0287899

Protein: Telomere-associated protein Rif1 N-terminal domain-containing protein

3D Structure

Loading viewer...

Related Domains

Browse other domains in Rif1_N →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyRif1_N(109.4.1.167)

Pfam Families

Rap1-interacting factor 1 N terminal

ClanCL0020TPR

External Links

AlphaFold DB: Q54JQ5 UniProt: Q54JQ5

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 276-620,641-825