ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q55H04_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/Q55H04_F1_nD4

Q55H04_F1_nD4

UID: 003261897

AlphaFold

Range: 561-685
AlphaFold: AF-Q55H04
UniProt: Q55H04 (all domains)
Gene: DDB_G0267306

Protein: Integrase catalytic domain-containing protein

3D Structure

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Related Domains

Browse other domains in RT_RNaseH →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRNaseH-like domain in reverse transcriptase(2484.5)

TT-groupRNaseH-like domain in reverse transcriptase(2484.5.1)

FFamilyRT_RNaseH(2484.5.1.2)

Pfam Families

PF17917RT_RNaseH

RNase H-like domain found in reverse transcriptase

ClanCL0219RNase_H

External Links

AlphaFold DB: Q55H04 UniProt: Q55H04

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 561-685