ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q54H25_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q54H25_F1_nD1

Q54H25_F1_nD1

UID: 003261935

AlphaFold

Range: 261-490
AlphaFold: AF-Q54H25
UniProt: Q54H25 (all domains)
Gene: rrpA

Protein: RNA-directed RNA polymerase (EC 2.7.7.48)

3D Structure

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Related Domains

Browse other domains in ResIII →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyResIII(2004.1.1.120)

Pfam Families

Type III restriction enzyme, res subunit

ClanCL0023P-loop_NTPase

External Links

AlphaFold DB: Q54H25 UniProt: Q54H25

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 261-490