ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q54MJ6_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q54MJ6_F1_nD1

Q54MJ6_F1_nD1

UID: 003262486

AlphaFold

Range: 41-370,471-825
AlphaFold: AF-Q54MJ6
UniProt: Q54MJ6 (all domains)
Gene: DDB_G0285901

Protein: Vps53-like domain-containing protein

3D Structure

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Related Domains

Browse other domains in Vps53_N, VPS53_C →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyVps53_N, VPS53_C(109.4.1.1317)

Pfam Families

PF04100Vps53_N

Vps53, N-terminal

ClanCL0020TPR

PF16854VPS53_C

Vacuolar protein sorting-associated protein 53 C-terminus

ClanCL0020TPR

External Links

AlphaFold DB: Q54MJ6 UniProt: Q54MJ6

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 41-370,471-825