ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q54DM8_F1_nD6 - ECOD Domain | ECOD

ECOD/Domains/Q54DM8_F1_nD6

Q54DM8_F1_nD6

UID: 003263164

AlphaFold

Range: 556-630
AlphaFold: AF-Q54DM8
UniProt: Q54DM8 (all domains)
Gene: cnrK

Protein: RBR-type E3 ubiquitin transferase (EC 2.3.2.31)

3D Structure

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Related Domains

Browse other domains in IBR_1 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupIBR domain(376.1.6)

FFamilyIBR_1(376.1.6.2)

Pfam Families

IBR domain

ClanCL0229RING

External Links

AlphaFold DB: Q54DM8 UniProt: Q54DM8

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 556-630