ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

Q54N48_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q54N48_F1_nD2

Q54N48_F1_nD2

UID: 003264153

AlphaFold

Range: 121-345
AlphaFold: AF-Q54N48
UniProt: Q54N48 (all domains)
Gene: clp1

Protein: Protein CLP1 homolog

3D Structure

Loading viewer...

Related Domains

Browse other domains in CLP1_P →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyCLP1_P(2004.1.1.211)

Pfam Families

mRNA cleavage and polyadenylation factor CLP1 P-loop

ClanCL0023P-loop_NTPase

External Links

AlphaFold DB: Q54N48 UniProt: Q54N48

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 121-345